The next generation of antiparasitics will likely be discovered through high-content and high-throughput screening using automated microscopy. As the amount of antiparasitic drug screening data swells at a rapid pace, researchers need to keep up by also developing analytical tools that can quickly and reliably analyze these data. A variety of proprietary and open-source software exists for these approaches, but none that are oriented towards images of worms (whether parasitic or free-living). We developed wrmXpress to fill this software gap.
wrmXpress has been used in screens to identify compounds with microfilaricidal and macrofilaricidal effects, characterize structure-activity relationships of drug classes against schistosomes, and assess the effects of cholinergic compounds on worm feeding. It has already been used to analyze dozens of terabytes worth of data.
wrmXpress v2.0.0 has been released and includes a graphical user interface for more widespread and inclusive use, modules for new phenotypic endpoints, and deep learning for image analysis. Our collaboration with the Zamanian Lab seeks to push the field forward and provide a flexible, intuitive software that is used by diverse labs and companies around the world.
Relevant publications
