| Title | Created At | Description | Merged At | PR Number | Related Github Creator | State | Updated At |
|---|---|---|---|---|---|---|---|
September 23, 2022 2:38 PM (UTC) | Incorporates #5 and #7 | September 23, 2022 2:40 PM (UTC) | 16 | September 23, 2022 2:40 PM (UTC) | |||
August 2, 2022 6:09 PM (UTC) | Supports images from \_S. mansoni\_ (2X) with or without adults in the well and \_Brugia\_ spp. (4X, tiled 2x2) without adults in the well. Binary diagnostic image is written to thumbnails. Fixes #13 | August 2, 2022 6:11 PM (UTC) | 14 | August 2, 2022 6:11 PM (UTC) | |||
July 29, 2022 2:06 PM (UTC) | July 29, 2022 2:07 PM (UTC) | 12 | July 29, 2022 2:07 PM (UTC) | ||||
July 28, 2022 5:07 PM (UTC) | Fixes #9 | July 28, 2022 5:08 PM (UTC) | 10 | July 28, 2022 5:08 PM (UTC) | |||
January 19, 2022 9:29 PM (UTC) | The \`species\` parameter is now incorporated in select modules. \`species == 'Sma'\` will adjust the segment and thumbnail modules. | January 19, 2022 9:29 PM (UTC) | 1 | January 19, 2022 9:29 PM (UTC) | |||
January 26, 2022 8:07 PM (UTC) | CP pipelines now use annotated training data and the XGBoost library to classify each straightened worm (single worm, multiple worms, partial worm, or debris). Predictions are added as columns to \`{plate}\_tidy.csv\` output data and can be used in downstream analyses. | January 26, 2022 8:07 PM (UTC) | 3 | January 26, 2022 8:07 PM (UTC) |
